BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C11SP1|AL427297
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1489 1762 0.0
>3x_Contig1489
Length = 10722
Score = 1762 bits (881), Expect = 0.0
Identities = 904/919 (98%)
Strand = Plus / Plus
Query: 5 atttagatccttacagaccccagtcaaagtaacatcagttgagtggataaattcgaatga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7365 atttagatccttacagaccccagtcaaagtaacatcagttgagtggataaattcgaatga 7424
Query: 65 attttctttgaaactggagcgcaaagaaagagcaatggcacctggtcagtactgctgttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7425 attttctttgaaactggagcgcaaagaaagagcaatggcacctggtcagtactgctgttt 7484
Query: 125 atatgtgaatgagagggtcattggaagtgggataatcgactgtgctcgatagtatactgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7485 atatgtgaatgagagggtcattggaagtgggataatcgactgtgctcgatagtatactgc 7544
Query: 185 agtgtatgcgcctcaagctaaaatactcgtctatagaatcaaataacttgcattctaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7545 agtgtatgcgcctcaagctaaaatactcgtctatagaatcaaataacttgcattctaatc 7604
Query: 245 acgtgataccatcatgtgtgtgaatcttttcaaatagaatcaccaacagccacatatggt 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7605 acgtgatatcatcatgtgtgtgaatcttttcaaatagaatcaccaacagccacatatggt 7664
Query: 305 cccagtcaggtgcaactgayattccaaagctataataamagaactggaaagagagtgtaa 364
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 7665 cccagtcaggtgcaactgatattccaaagctataataaaagaactggaaagagagtgtaa 7724
Query: 365 caactgaaaagaattttggaaatagataatctccgccgttaagtatcttgagtacaacac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7725 caactgaaaagaattttggaaatagataatctccgccgttaagtatcttgagtacaacac 7784
Query: 425 agaatgtcaaatyagaggtattttttgtaatctacaatatagaactctacyacyctgact 484
||||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 7785 agaatgttaaattagaggtattttttgtaatctacaatatagaactctactactctgact 7844
Query: 485 gamaacyaaacatatcgacaagggaaattcgtataatgtctggtcaatttgccaaggmac 544
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7845 gaaaactaaacatatcgacaagggaaattcgtataatgtctggtcaatttgccaaggaac 7904
Query: 545 ttgctgttgccactcaagccgtccgcmaagcttcattgctaactaagagaattcaagcag 604
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7905 ttgctgttgcaactcaagccgtccgcaaagcttcattgctaactaagagaattcaagcag 7964
Query: 605 atgtcatatctagcagtaactctactatmacamaatctgatcaaagtcctgttaccatcg 664
|||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 7965 atgttatatctagcagtaactctactataacaaaatctgatcaaagtcctgttaccatcg 8024
Query: 665 gggactactcttgccaagctatcatcatcaatgccattaaatcaaacttcaaggatgatg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8025 gggactactcttgccaagctatcatcatcaatgccattaaatcaaacttcaaggatgatg 8084
Query: 725 ctgttgtcggtgaagaatccagtgatggtttgacagattcttttatttctgagattttaa 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8085 ctgttgtcggtgaagaatccagtgatggtttgacagattcttttatttctgagattttaa 8144
Query: 785 ctacaattcaggataacgacaaagtatactccgaagtttttgcagacgtcacacaacaag 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8145 ctacaattcaggataacgacaaagtatactccgaagtttttgcagacgtcacacaacaag 8204
Query: 845 aggagaaagacgtcccttttgtcaatgaggaattccctctaaattccattgaagaaatta 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8205 aggagaaagacgtcccttttgtcaatgaggaattccctctaaattccattgaagaaatta 8264
Query: 905 aaagagttattgattttgg 923
|||||||||||||||||||
Sbjct: 8265 aaagagttattgattttgg 8283
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6975
Number of Sequences: 1807
Number of extensions: 6975
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)